ИСТИНА

Chudakov D.M.

Соавторы: Лебедев Ю.Б., Shugay M., Звягин И., Bolotin D.A., Britanova O.V., Mamedov I.Z., Pogorelyy M.V., Staroverov D.B., Komech E.A., Шаронов Г.В., Egorov E.S., Lukyanov S., Лукьянов С.А. показать полностью..., Путинцева Е.В., Minervina A.A., Turchaninova M.A., Walczak A., Мишин А.С., Kotlobay A.A., Mikelov A.I., Serebrovskaya E.O., Shelenkov A.A., VERKHUSHA, Барсова Е.В., Бочкова А.А., Зарайский А.Г., Мамедов И.З., Мерзляк М.Н., Ребриков Д.В., Субач Ф.В., BOGANOV A., Balunets D.V., Belousov V.V., Belousov V.V., Bochkova A.G., Bogatyreva N., Bozhanova N.G., Chkalina A.V., Dauter Z., Ermakova G.V., Favorov A., Fedorenko D.A., Franzke A., Gorodnicheva T.V., Grüenwald D., Gundorov I.S., Gurskaya N.G., Ivankov D.N., Izraelson M., Karnaukhov V.K., Komkov A.Y., Kondrashov F.A., Kurnikova M.A., Linnemann C., Lukyanov K.A., Martynov V.I., McLaren J.E., Meer M.V., Mora T., Mutovina Z.Y., Nasonov E.L., Novik A.A., Pletnev S., Pletnev V., Pletneva N.V., Rudensky A.Y., Schumacher T.N., Shagin D.A., Shagina I.A., Shcherbo D., Shmidt E.I., Soylemez O., Sung U., Tawfik D.S., Thierry P., Touzel M.P., Usmanova D., Ustyugova S.V., Vlasov P.S., Wlodawer A., Yampolsky I., Yoshimura M., Zagaynova E.V., Zakharova M.Y., Zaretsky A.R., Zhang J., Атауллаханов Р.И., Багаев Д.В., Балабан П.М., Баранов М.С., Барышникова А.М., Белогуров А.А., Брутер А.В., Брюшкова Е.А., Быкова Н.А., Габибов А.Г., Давыдов А.Н., Захарова М.Н., Золотарева О.И., Зоров Д.Б., Иванов В.О., Иллариошкин С.Н., Кабилов М.Р., Карганова Г.Г., Кельмансон И.В., Коваленко Е.И., Ковальчук М.В., Кондрашов А.С., Конева А., Коростин Д.О., Кост А.Н., Логачёва М.Д., Ломакин Я.А., Мухина В.С., Назаров В.И., Нестеренко Л.Н., Никитин Е.С., Овчинникова Л.А., Попов В.О., Рубцов Ю.П., Самойленко И.В., Симанив Т.О., Скаткова В.Ю., Субач О.М., Сычева А.А., Тупикин А.А., Шостак Н.А., иванова м.и.

26 статей

Количество цитирований статей в журналах по данным Web of Science: 1848, Scopus: 1971

IstinaResearcherID (IRID): 1483358

Деятельность

• Статьи в журналах

  • • 2022 Deconvolution of B cell receptor repertoire in multiple sclerosis patients revealed a delay in tBreg maturation
    • Lomakin Yakov A., Zvyagin Ivan V., Ovchinnikova Leyla A., Kabilov Marsel R., Staroverov Dmitriy B., Mikelov Artem, Tupikin Alexey E., Zakharova Maria Y., Bykova Nadezda A., Mukhina Vera S., Favorov Alexander V., Ivanova Maria, Simaniv Taras, Rubtsov Yury P., Chudakov Dmitriy M., Zakharova Maria N., Illarioshkin Sergey N., Belogurov Alexey A., Gabibov Alexander G.
    • в журнале Frontiers in immunology, издательство Frontiers Research Foundation] ([Lausanne, Switzerland), том 13 DOI
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    • 2022 Pinpointing the tumor-specific T cells via TCR clusters
    • Goncharov Mikhail M., Bryushkova Ekaterina A., Sharaev Nikita I., Skatova Valeria D., Baryshnikova Anastasiya M., Sharonov George V., Karnaukhov Vadim, Vakhitova Maria T., Samoylenko Igor V., Demidov Lev V., Lukyanov Sergey, Chudakov Dmitriy M., Serebrovskaya Ekaterina O.
    • в журнале eLife, том 11 DOI
  • • 2020 Adoptive Immunotherapy Based on Chain-Centric TCRs in Treatment of Infectious Diseases
    • Kalinina A.A., Nesterenko L.N., Bruter A.V., Balunets D.V., Chudakov D.M., Izraelson M., Britanova O.V., Khromykh L.M., Kazansky D.B.
    • в журнале iScience, издательство Cell Press (United States), том 23, № 12
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    • 2020 Primary and secondary anti-viral response captured by the dynamics and phenotype of individual T cell clones
    • Minervina AA, Pogorelyy MV, Komech EA, Karnaukhov VK, Bacher P., Rosati E., Franke A., Chudakov DM, Mamedov IZ, Lebedev YB, Mora T., Walczak AM
    • в журнале eLife, том 9, с. e53704 DOI
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    • 2019 Detecting T cell receptors involved in immune responses from single repertoire snapshots
    • Pogorelyy Mikhail V., Minervina Anastasia A., Shugay Mikhail, Chudakov Dmitriy M., Lebedev Yuri B., Mora Thierry, Walczak Aleksandra M.
    • в журнале PLoS Biology, издательство Public Library of Science (United States), том 17, № 6, с. e3000314 DOI
  • • 2018 CD8$\mathplus$ T cells with characteristic T cell receptor beta motif are detected in blood and expanded in synovial fluid of ankylosing spondylitis patients
    • Komech Ekaterina A., Pogorelyy Mikhail V., Egorov Evgeniy S., Britanova Olga V., Rebrikov Denis V., Bochkova Anna G., Shmidt Evgeniya I., Shostak Nadejda A., Shugay Mikhail, Lukyanov Sergey, Mamedov Ilgar Z., Lebedev Yuriy B., Chudakov Dmitriy M., Zvyagin Ivan V.
    • в журнале Rheumatology (Oxford, England), издательство Oxford University Press (United Kingdom) DOI
  • • 2018 Exploring the pre-immune landscape of antigen-specific T cells
    • Pogorelyy Mikhail V., Fedorova Alla D., McLaren James E., Ladell Kristin, Bagaev Dmitri V., Eliseev Alexey V., Mikelov Artem I., Koneva Anna E., Zvyagin Ivan V., Price David A., Chudakov Dmitry M., Shugay Mikhail
    • в журнале Genome Medicine, издательство BioMed Central (London), том 10, № 1 DOI
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    • 2018 Precise tracking of vaccine-responding T cell clones reveals convergent and personalized response in identical twins
    • Pogorelyy Mikhail V., Minervina Anastasia A., Touzel Maximilian Puelma, Sycheva Anastasiia L., Komech Ekaterina A., Kovalenko Elena I., Karganova Galina G., Egorov Evgeniy S., Komkov Alexander Yu, Chudakov Dmitriy M., Mamedov Ilgar Z., Mora Thierry, Walczak Aleksandra M., Lebedev Yuri B.
    • в журнале Proceedings of the National Academy of Sciences of the United States of America, издательство National Academy of Sciences (United States), том 115, № 50, с. 12704-12709 DOI
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    • 2017 A high-throughput assay for quantitative measurement of PCR errors
    • Shagin D.A., Shagina I.A., Zaretsky A.R., Barsova E.V., Kelmanson I.V., Lukyanov S., Chudakov D.M., Shugay M.
    • в журнале Scientific reports, издательство Nature Publishing Group (United Kingdom), том 7, № 1, с. 2718 DOI
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    • 2017 Antigen receptor repertoire profiling from RNA-seq data
    • Bolotin DA, Poslavsky S., Davydov AN, Frenkel FE, Fanchi L., Zolotareva OI, Hemmers S., Putintseva EV, Obraztsova AS, Shugay M., Ataullakhanov RI, Rudensky AY, Schumacher TN, Chudakov DM
    • в журнале Nature Biotechnology, издательство Nature Publishing Group (United Kingdom), том 35, № 10, с. 908-911 DOI
  • • 2017 Insertion of the voltage-sensitive domain into circularly permuted red fluorescent protein as a design for genetically encoded voltage sensor
    • Kost Liubov A., Nikitin Evgeny S., Ivanova Violetta O., Sung Uhna, Putintseva Ekaterina V., Chudakov Dmitry M., Balaban Pavel M., Lukyanov Konstantin A., Bogdanov Alexey M.
    • в журнале PLoS ONE, издательство Public Library of Science (United States), том 12, № 9 DOI
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    • 2016 Local fitness landscape of the green fluorescent protein
    • Sarkisyan Karen S., Bolotin Dmitry A., Meer Margarita V., Usmanova Dinara R., Mishin Alexander S., Sharonov George V., Ivankov Dmitry N., Bozhanova Nina G., Baranov Mikhail S., Soylemez Onuralp, Bogatyreva Natalya S., Vlasov Peter K., Egorov Evgeny S., Logacheva Maria D., Kondrashov Alexey S., Chudakov Dmitry M., Putintseva Ekaterina V., Mamedov Ilgar Z., Tawfik Dan S., Lukyanov Konstantin A., Kondrashov Fyodor A.
    • в журнале Nature, издательство Nature Publishing Group (United Kingdom), том 533, № 7603, с. 397-401 DOI
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    • 2015 Quantitative Profiling of Immune Repertoires for Minor Lymphocyte Counts Using Unique Molecular Identifiers
    • Egorov E.S., Merzlyak E.M., Shelenkov A.A., Britanova O.V., Sharonov G.V., Staroverov D.B., Bolotin D.A., Davydov A.N., Barsova E., Lebedev Y.B., Shugay M., Chudakov D.M.
    • в журнале Journal of Immunology, издательство American Association of Immunologists (United States), том 194, № 12, с. 6155-6163 DOI
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    • 2015 TCR: AN R PACKAGE FOR T CELL RECEPTOR REPERTOIRE ADVANCED DATA ANALYSIS
    • Nazarov V.I., Pogorelyy M.V., Komech E.A., Zvyagin I.V., Bolotin D.A., Shugay M., Chudakov D.M., Lebedev Y.B., Mamedov I.Z.
    • в журнале BMC Bioinformatics, издательство BioMed Central (London), том 16, № 1, с. 175 DOI
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    • 2014 AGE-RELATED DECREASE IN TCR REPERTOIRE DIVERSITY MEASURED WITH DEEP AND NORMALIZED SEQUENCE PROFILING
    • Britanova O.V., Putintseva E.V., Shugay M., Merzlyak E.M., Turchaninova M.A., Staroverov D.B., Bolotin D.A., Lukyanov S., Bogdanova E.A., Mamedov I.Z., Lebedev Y.B., Chudakov D.M.
    • в журнале Journal of Immunology, издательство American Association of Immunologists (United States), том 192, № 6, с. 2689-2698
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    • 2014 DISTINCTIVE PROPERTIES OF IDENTICAL TWINS' TCR REPERTOIRES REVEALED BY HIGH-THROUGHPUT SEQUENCING
    • Zvyagin I.V., Pogorelyy M.V., Ivanova M.E., Komech E.A., Shugay M., Bolotin D.A., Shelenkov A.A., Kurnosov A.A., Staroverov D.B., Chudakov D.M., Lebedev Y.B., Mamedov I.Z.
    • в журнале Proceedings of the National Academy of Sciences of the United States of America, издательство National Academy of Sciences (United States), том 111, № 16, с. 5980-5985
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    • 2013 Pairing of T-cell receptor chains via emulsion PCR
    • Turchaninova Maria A., Britanova Olga V., Bolotin Dmitriy A., Shugay Mikhail, Putintseva Ekaterina V., Staroverov Dmitriy B., Sharonov George, Shcherbo Dmitriy, Zvyagin Ivan V., Mamedov Ilgar Z., Linnemann Carsten, Schumacher Ton N., Chudakov Dmitriy M.
    • в журнале European Journal of Immunology, издательство John Wiley & Sons Ltd. (United Kingdom), том 43, № 9, с. 2507-2515 DOI
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    • 2012 FIRST AUTOLOGOUS HEMATOPOIETIC SCT FOR ANKYLOSING SPONDYLITIS: A CASE REPORT AND CLUES TO UNDERSTANDING THE THERAPY
    • Britanova O.V., Staroverov D.B., Bolotin D.A., Mamedov I.Z., Turchaninova M.A., Putintseva E.V., Kotlobay A.A., Lukyanov S., Lebedev Y.B., Chudakov D.M., Bochkova A.G., Fedorenko D.A., Novik A.A.
    • в журнале Bone Marrow Transplantation, издательство Nature Publishing Group (United Kingdom), том 47, № 11, с. 1479-1481 DOI
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    • 2012 NEXT GENERATION SEQUENCING FOR TCR REPERTOIRE PROFILING: PLATFORM-SPECIFIC FEATURES AND CORRECTION ALGORITHMS
    • Bolotin D.A., Mamedov I.Z., Britanova O.V., Zvyagin I.V., Shagin D., Ustyugova S.V., Turchaninova M.A., Lukyanov S., Lebedev Y.B., Chudakov D.M.
    • в журнале European Journal of Immunology, издательство John Wiley & Sons Ltd. (United Kingdom), том 42, № 11, с. 3073-3083 DOI
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    • 2011 Light-induced blockage of cell division with a chromatin-targeted phototoxic fluorescent protein
    • Serebrovskaya E.O., Gorodnicheva T.V., Ermakova G.V., Solovieva E.A., Sharonov G.V., Zagaynova E.V., Chudakov D.M., Lukyanov S., Zaraisky A.G., Lukyanov K.A.
    • в журнале Biochemical Journal, издательство Portland Press, Ltd. (United Kingdom), том 435, № 1, с. 65-71 DOI
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    • 2010 Contribution of functional KIR3DL1 to ankylosing spondylitis
    • Zvyagin I.V., Mamedov I.Z., Britanova O.V., Staroverov D.B., Nasonov E.L., Bochkova A.G., Chkalina A.V., Kotlobay A.A., Korostin D.O., Rebrikov D.V., Lukyanov S., Lebedev Y.B., Chudakov D.M.
    • в журнале Cellular & molecular immunology., издательство Chinese Society of Immunology (China), том 7, № 6, с. 471-476
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    • 2009 Green fluorescent proteins are light-induced electron donors
    • Bogdanov Alexey M., Mishin Alexander S., Yampolsky Ilia V., Belousov Vsevolod V., Chudakov Dmitriy M., Subach Fedor V., Verkhusha Vladislav V., Lukyanov Sergey, Lukyanov Konstantin A.
    • в журнале Nature Chemical Biology, издательство Nature Publishing Group (United Kingdom), том 5, № 7, с. 459-461 DOI
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    • 2009 Individual characterization of stably expanded T cell clones in ankylosing spondylitis patients
    • Mamedov I.Z., Britanova O.V., Chkalina A.V., Staroverov D.B., Amosova A.L., Mishin A.S., Kurnikova M.A., Zvyagin I.V., Mutovina Z.Y., Gordeev A.V., Khaidukov S.V., Sharonov G.V., Shagin D.A., Chudakov D.M., Lebedev Y.B.
    • в журнале Autoimmunity, издательство Taylor & Francis (United Kingdom), том 42, № 6, с. 525-536
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    • 2009 Structural Basis for Phototoxicity of the Genetically Encoded Photosensitizer KillerRed
    • Pletnev Sergei, Gurskaya Nadya G., Pletneva Nadya V., Lukyanov Konstantin A., Chudakov Dmitri M., Martynov Vladimir I., Popov Vladimir O., Kovalchuk Mikhail V., Wlodawer Alexander, Dauter Zbigniew, Pletnev Vladimir
    • в журнале Journal of Biological Chemistry, издательство American Society for Biochemistry and Molecular Biology Inc. (United States), том 284, № 46, с. 32028-32039 DOI
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    • 2008 Conversion of Red Fluorescent Protein into a Bright Blue Probe
    • Subach Oksana M., Gundorov Illia S., Yoshimura Masami, Subach Fedor V., Zhang Jinghang, Grüenwald David, Souslova Ekaterina A., Chudakov Dmitriy M., Verkhusha Vladislav V.
    • в журнале Chemistry and Biology, издательство Cell Press (United States), том 15, № 10, с. 1116-1124 DOI
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    • 2003 Kindling fluorescent proteins for precise in vivo photolabeling
    • Chudakov D.M., Belousov V.V., Zaraisky A.G., Novoselov V.V., Staroverov D.B., Zorov D.B., Lukyanov S., Lukyanov K.A.
    • в журнале Nature Biotechnology, издательство Nature Publishing Group (United Kingdom), том 21, № 2, с. 191-194 DOI