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Genome Researchжурнал

Статьи, опубликованные в журнале

• 
  • 2020 A limited set of transcriptional programs define major cell types
  • Breschi Alessandra, Muñoz-Aguirre Manuel, Wucher Valentin, Davis Carrie A., Garrido-Martín Diego, Djebali Sarah, Gillis Jesse, Pervouchine Dmitri D., Vlasova Anna, Dobin Alexander, Zaleski Chris, Drenkow Jorg, Danyko Cassidy, Scavelli Alexandra, Reverter Ferran, Snyder Michael P., Gingeras Thomas R., Guigó Roderic
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 30, № 7, с. 1047-1059 DOI
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  • 2020 A limited set of transcriptional programs define major cell types
  • Breschi Alessandra, Muñoz-Aguirre Manuel, Wucher Valentin, Davis Carrie A., Garrido-Martín Diego, Djebali Sarah, Gillis Jesse, Pervouchine Dmitri D., Vlasova Anna, Dobin Alexander, Zaleski Chris, Drenkow Jorg, Danyko Cassidy, Scavelli Alexandra, Reverter Ferran, Snyder Michael P., Gingeras Thomas R., Guigó Roderic
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 30, № 7, с. 1047-1059 DOI
• 
  • 2020 Single-cell-resolution transcriptome map of human, chimpanzee, bonobo, and macaque brains
  • Khrameeva Ekaterina, Kurochkin Ilia, Han Dingding, Guijarro Patricia, Kanton Sabina, Santel Malgorzata, Qian Zhengzong, Rong Shen, Mazin Pavel, Sabirov Marat, Bulat Matvei, Efimova Olga, Tkachev Anna, Guo Song, Sherwood Chet C., Camp J.Gray, Pääbo Svante, Treutlein Barbara, Khaitovich Philipp
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 30, № 5, с. 776-789 DOI
• 
  • 2020 Translation initiation downstream from annotated start codons in human mRNAs coevolves with the Kozak context
  • Benitez-Cantos Maria S., Yordanova Martina M., O'Connor Patrick B.F., Zhdanov Alexander V., Kovalchuk Sergey I., Papkovsky Dmitri B., Andreev Dmitry E., Baranov Pavel V.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 30, № 7, с. 974-984 DOI
• 
  • 2019 Distinct types of short open reading frames are translated in plant cells
  • Fesenko Igor, Kirov Ilya, Kniazev Andrey, Khazigaleeva Regina, Lazarev Vassili, Kharlampieva Daria, Grafskaia Ekaterina, Zgoda Viktor, Butenko Ivan, Arapidi Georgy, Mamaeva Anna, Ivanov Vadim, Govorun Vadim
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 29, № 9, с. 1464-1477 DOI
• 
  • 2019 Distinct types of short open reading frames are translated in plant cells
  • Fesenko Igor, Kirov Ilya, Kniazev Andrey, Khazigaleeva Regina, Lazarev Vassili, Kharlampieva Daria, Grafskaia Ekaterina, Zgoda Viktor, Butenko Ivan, Arapidi Georgy, Mamaeva Anna, Ivanov Vadim, Govorun Vadim
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 29, № 9, с. 1464-1477 DOI
• 
  • 2019 Distinct types of short open reading frames are translated in plant cells
  • Fesenko Igor, Kirov Ilya, Kniazev Andrey, Khazigaleeva Regina, Lazarev Vassili, Kharlampieva Daria, Grafskaia Ekaterina, Zgoda Viktor, Butenko Ivan, Arapidi Georgy, Mamaeva Anna, Ivanov Vadim, Govorun Vadim
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 29, № 9, с. 1464-1477 DOI
• 
  • 2019 Distinct types of short open reading frames are translated in plant cells
  • Fesenko Igor, Kirov Ilya, Kniazev Andrey, Khazigaleeva Regina, Lazarev Vassili, Kharlampieva Daria, Grafskaia Ekaterina, Zgoda Viktor, Butenko Ivan, Arapidi Georgy, Mamaeva Anna, Ivanov Vadim, Govorun Vadim
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 29, № 9, с. 1464-1477 DOI
• • 2019 Systems analysis reveals complex biological processes during virus infection fate decisions
  • Argilaguet J., Pedragosa M., Esteve-Codina A., Riera G., Vidal E., Peligero-Cruz C., Casella V., Andreu D., Kaisho T., Bocharov G., Ludewig B., Heath S., Meyerhans A.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), № gr.241372.118 DOI
• • 2017 Fungicidal activity of ultradisperse numic sapropel suspensions
  • Barakova N.V., Sharova N.Yu, Yuskauskajte A.R., Mityukov A.S., Romanov V.A., Nsengumuremyi D.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 15, № 3, с. 639-648
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  • 2016 APOBEC-induced mutations in human cancers are strongly enriched on the lagging DNA strand during replication
  • Seplyarskiy V.B., Soldatov R.A., Popadin K.Y., Antonarakis S.E., Bazykin G.A., Nikolaev S.I.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 26, № 2, с. 174-182 DOI
• • 2016 APOBEC3A/B-induced mutagenesis is responsible for 20% of heritable mutations in the TpCpW context
  • Seplyarskiy V.B., Andrianova M.A., Bazykin G.A.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States) DOI
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  • 2016 Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains
  • Ulianov SV, Khrameeva EE, Gavrilov AA, Flyamer IM, Kos P., Mikhaleva EA, Penin AA, Logacheva MD, Imakaev MV, Chertovich A., Gelfand MS, Shevelyov YY, Razin SV
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 26, с. 70-84 DOI
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  • 2016 Comprehensive variation discovery and recovery of missing sequence in the pig genome using multiple de novo assemblies
  • Mingzhou Li, Chen Lei, Tian Shilin, Lin Yu, Tang Qianzi, Zhou Xuming, Diyan Li, Yeung Carol K.L., Che Tiandong, Jin Long, Yuhua Fu, Jideng Ma, Wang Xun, Jiang Anan, Lan Jing, Pan Qi, Liu Yingkai, Luo Zonggang, Guo Zongyi, Liu Haifeng, Zhu Li, Shuai Surong, Tang Guoqing, Zhao Jiugang, Jiang Yanzhi, Bai Lin, Zhang Shunhua, Mai Miaomiao, Changchun Li, Wang Dawei, Yiren Gu, Wang Guosong, Hongfeng Lu, Yan Li, Zhu Haihao, Zongwen Li, Ming Li, Gladyshev Vadim N., Jiang Zhi, Zhao Shuhong, Wang Jinyong, Ruiqiang Li, Xuewei Li
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 27, № 5, с. 865-874 DOI
• • 2016 EXTRACTION OF BIOLOGICALLY ACTIVE COMPOUNDS FROM FRUIT, BERRY AND GRAIN GRIST USING VISCOSTAR 150L ENZYME COMPLEX
  • Barakova N.V., Skvortsova N.N., Sharova N.Y.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 14, № II, с. 1271-1283
• • 2016 biologically active compounds from fruit, berry and grain grist using viscostar 150L enzyme complex Barakova
  • Extraction of
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States)
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  • 2015 A recent bottleneck of Y chromosome diversity coincides with a global change in culture
  • Karmin M., Saag L., Vicente M., Sayres M.A.W, Jarve M., Talas U.G., Rootsi S., Ilumae A.M., Magi R., Mitt M., Pagani L., Puurand T., Faltyskova Z., Clemente F., Cardona A., Metspalu E., Sahakyan H., Yunusbayev B., Hudjashov G.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 25, № 4, с. 459-466
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  • 2015 A recent bottleneck of Y chromosome diversity coincides with a global change in culture
  • Karmin M., Saag L., Vicente M., Sayres M.A.W, Jarve M., Talas U.G., Rootsi S., Ilumae A.M., Magi R., Mitt M., Pagani L., Puurand T., Faltyskova Z., Clemente F., Cardona A., Metspalu E., Sahakyan H., Yunusbayev B., Hudjashov G., DeGiorgio M., Loogvali E.L., Eichstaedt C., Eelmets M., Chaubey G., Tambets K., Litvinov S., Mormina M., Xue Y.L., Ayub Q., Zoraqi G., Korneliussen T.S., Akhatova F., Lachance J., Tishkoff S., Momynaliev K., Ricaut F.X., Kusuma P., Razafindrazaka H., Pierron D., Cox M.P.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 25, № 4, с. 459-466
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  • 2015 A recent bottleneck of Y chromosome diversity coincides with a global change in culture
  • Karmin M., Saag L., Vicente M., Sayres M.A.W, Jarve M., Talas U.G., Rootsi S., Ilumae A.M., Magi R., Mitt M., Pagani L., Puurand T., Faltyskova Z., Clemente F., Cardona A., Metspalu E., Sahakyan H., Yunusbayev B., Hudjashov G., DeGiorgio M., Loogvali E.L., Eichstaedt C., Eelmets M., Chaubey G., Tambets K., Litvinov S., Mormina M., Xue Y.L., Ayub Q., Zoraqi G., Korneliussen T.S., Akhatova F., Lachance J., Tishkoff S., Momynaliev K., Ricaut F.X.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 25, № 4, с. 459-466
• 
  • 2015 A recent bottleneck of Y chromosome diversity coincides with a global change in culture
  • Karmin M., Saag L., Vicente M., Sayres M.A.W, Jarve M., Talas U.G., Rootsi S., Ilumae A.M., Magi R., Mitt M., Pagani L., Puurand T., Faltyskova Z., Clemente F., Cardona A., Metspalu E., Sahakyan H., Yunusbayev B., Hudjashov G., DeGiorgio M., Loogvali E.L., Eichstaedt C., Eelmets M., Chaubey G., Tambets K., Litvinov S., Mormina M., Xue Y.L., Ayub Q., Zoraqi G., Korneliussen T.S., Akhatova F., Lachance J., Tishkoff S., Momynaliev K., Ricaut F.X., Kusuma P., Razafindrazaka H., Pierron D., Cox M.P.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 25, № 4, с. 459-466
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  • 2015 Evolution of selenophosphate synthetases: Emergence and relocation of function through independent duplications and recurrent subfunctionalization
  • Mariotti M., Santesmasses D., Capella-Gutierrez S., Mateo A., Arnan C., Johnson R., D’Aniello S., Yim S.H., Gladyshev V.N., Serras F., Corominas M., Gabaldón T., Guigó R.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 25, № 9, с. 1256-1267 DOI
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  • 2015 RECENT BOTTLENECK OF Y CHROMOSOME DIVERSITY COINCIDES WITH A GLOBAL CHANGE IN CULTURE
  • BALANOVSKAYA E.V., et al.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 25, № 4, с. 459-466
• • 2015 The genome of the vervet ($\less$i$\greater$Chlorocebus aethiops sabaeus$\less$/i$\greater$)
  • Warren Wesley C., Jasinska Anna J., García-Pérez Raquel, Svardal Hannes, Tomlinson Chad, Rocchi Mariano, Archidiacono Nicoletta, Capozzi Oronzo, Minx Patrick, Montague Michael J., Kyung Kim, Hillier LaDeana W., Kremitzki Milinn, Graves Tina, Chiang Colby, Hughes Jennifer, Tran Nam, Huang Yu, Ramensky Vasily, Choi Oi-wa, Jung Yoon J., Schmitt Christopher A., Juretic Nikoleta, Wasserscheid Jessica, Turner Trudy R., Wiseman Roger W., Tuscher Jennifer J., Karl Julie A., Schmitz Jörn E., Zahn Roland, O\textquotesingleConnor David H., Redmond Eugene, Nisbett Alex, Jacquelin Béatrice, Müller-Trutwin Michaela C., Brenchley Jason M., Dione Michel, Antonio Martin, Schroth Gary P., Kaplan Jay R., Jorgensen Matthew J., Thomas Gregg W.C., Hahn Matthew W., Raney Brian J., Aken Bronwen, Nag Rishi, Schmitz Juergen, Churakov Gennady, Noll Angela, Stanyon Roscoe, Webb David, Thibaud-Nissen Francoise, Nordborg Magnus, Marques-Bonet Tomas, Dewar Ken, Weinstock George M., Wilson Richard K., Freimer Nelson B.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 25, № 12, с. 1921-1933 DOI
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  • 2014 Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome
  • Pedersen J.S., Valen E., Velazquez A.M.V, Parker B.J., Rasmussen M., Lindgreen S., Lilje B., Tobin D.J., Kelly T.K., Vang S., Andersson R., Jones P.A., Hoover C.A., Tikhonov A., Prokhortchouk E., Rubin E.M., Sandelin A., Gilbert M.T.P, Krogh A., Willerslev E., Orlando L.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 24, № 3, с. 454-466 DOI
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  • 2010 Young proteins experience more variable selection pressures than old proteins
  • Vishnoi Anchal, Kryazhimskiy Sergey, Bazykin Georgii A., Hannenhalli Sridhar, Plotkin Joshua B.
  • в журнале Genome Research, издательство Cold Spring Harbor Laboratory Press (United States), том 20, № 11, с. 1574-1581